BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B10SP1|AL428503
(788 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1343 1510 0.0
>3x_Contig1343
Length = 6877
Score = 1510 bits (753), Expect = 0.0
Identities = 774/789 (98%), Gaps = 1/789 (0%)
Strand = Plus / Minus
Query: 1 atcactttctcggccggagaccaatttgagcagccagctgctcttcgccggaaaaaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4134 atcactttctcggccggagaccaatttgagcagccagctgctcttcgccggaaaaaagag 4075
Query: 61 ctctaaaaagaaaaaccgttatttaacaaagagatcgaccaattttctgtgagacgacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4074 ctctaaaaagaaaaaccgttatttaacaaagagatcgaccaattttctgtgagacgacat 4015
Query: 121 aattatgccttgtaaaagaaatactaaggaggaaccagtatctgcaagaagtcatacgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4014 aattatgccttgtaaaagaaatactaaggaggaaccagtatctgcaagaagtcatacgcg 3955
Query: 181 aaacagcacttcaatcgaataacagagtatcatatcgagg-ctgagacgcgtcaaacatg 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3954 aaacagcacttcaatcgaataacagagtatcatatcgagggctgagacgcgtcaaacatg 3895
Query: 240 caacccaggattgtgttaaaggcataggttaccattcactctggacttaactttggcttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3894 caacccaggattgtgttaaaggcataggttaccattcactctggacttaactttggcttc 3835
Query: 300 gtcacattaaaacacatcaacttttccctctggtacgtttcatgcacaattacgtttttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3834 gtcacattaaaacacatcaacttttccctctggtacgtttcatgcacaattacgtttttt 3775
Query: 360 tagtttatttttatgttcgaacctctttttctcggattcttgtagttgtatacgaattat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3774 tagtttatttttatgttcgaacctctttttctcggattcttgtagttgtatacgaattat 3715
Query: 420 gtttcgtggtaaatctacatgcgtcatttattaaaaagaaatgcaaacaaaagaatgcta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3714 gtttcgtggtaaatctacatgcgtcatttattaaaaagaaatgcaaacaaaagaatgcta 3655
Query: 480 ttacccggmatactaaaattatatcacgtgacgagtatttttttmaaaamagtttactct 539
|||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 3654 ttacccggaatactaaaattatatcacgtgacgagtatttttttaaaaaaagtttactct 3595
Query: 540 taaaatatgatcatcttgwacgaagaatgatgcgacgctagatttgagccaaatttyyyt 599
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 3594 taaaatatgatcatcttgaacgaagaatgatgcgacgctagatttgagccaaattttttt 3535
Query: 600 yttcaatcgttctttgtctgcmtcgatgaaaaattttcctttctgcaagtbttatataar 659
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 3534 tttcaatcgttctttgtctgcatcgatgaaaaattttcctttctgcaagttttatataaa 3475
Query: 660 ctcatcaccttctttcaatacttttbmcctattcatttgtgttgttcgaattcatcattt 719
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3474 ctcatcaccttctttcaatactttttacctattcatttgtgttgttcgaattcatcattt 3415
Query: 720 gtttcaattcgttcttttatagcctccctcctcatcaactaaactacatatcgmtcaatc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3414 gtttcaattcgttcttttatagcctccctcctcatcaactaaactacatatcgatcaatc 3355
Query: 780 aaagatggg 788
|||||||||
Sbjct: 3354 aaagatggg 3346
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6274
Number of Sequences: 1807
Number of extensions: 6274
Number of successful extensions: 148
Number of sequences better than 1.0e-20: 1
length of query: 788
length of database: 10,358,551
effective HSP length: 16
effective length of query: 772
effective length of database: 10,329,639
effective search space: 7974481308
effective search space used: 7974481308
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)